Influenza Virus Mashup

Influenza Virus Mashup

Archive for February, 2011

[Crof's H5N1] WHO: Three H5N1 cases in Egypt

Posted by Automator On February - 28 - 2011

Via WHO: Avian influenza - situation in Egypt - update 44.

The Ministry of Health of Egypt has announced 3 new confirmed cases of human infection with avian influenza A (H5N1) virus. 

The first case is a 26 year-old female from Dakahlia Governorate. She developed symptoms on 18 January and was hospitalized on 23 January. She has recovered and was discharged on 7 February. 

The second case is a 45 year-old male from Menofia Governorate. He developed symptoms on 20 January and was hospitalized on 26 January. He died on 5 February. 

The third case is a 4 year-old male from Damiata Governorate. He developed symptoms on 14 February and was hospitalized on 16 February. He is in a stable condition. 

Investigations into the source of infection indicate that the three cases had exposure to poultry suspected to have avian influenza. 

The cases were confirmed by the Egyptian Central Public Health Laboratories, a National Influenza Center of the WHO Global Influenza Surveillance Network. 

Of the 125 cases confirmed to date in Egypt, 41 have been fatal.

[Crof's H5N1] Coston on bush meat

Posted by Automator On February - 28 - 2011

Yesterday I mentioned an item about chimpanzee meat found in Britain. Mike Coston at Avian Flu Diary has an excellent post on the issue: Bushmeat,`Wild Flavor’ & EIDs. Highly recommended.

[Avian Flu Diary] Bushmeat,`Wild Flavor’ & EIDs

Posted by Automator On February - 28 - 2011

(Mon, 28 Feb 2011 12:00:00 +0000)

 

 

 

# 5344

 

 

During the opening years of the first decade of the 21st century, `wild flavor’ restaurants flourished in many parts of China, but most particularly in Guangzhou Province.

 

There you could partake in all sorts of exotic dishes – often slaughtered and cooked in front of you - including dog, cat, civit, muskrat, ferret, monkey, along with a variety of snakes, reptiles, and birds.

 

What are commonly referred to as `bushmeat’.

 

For a horrific description of the conditions in these restaurants, I would direct you to an essay by Karl Taro Greenfeld called Wild Flavor which appeared in the Paris Review in 2005.

 

Greenfeld, you may recall, is the author of The China Syndrome: The True Story of the 21st Century’s First Great Epidemic.  Perhaps the most authoritative (and absolutely riveting) account of the SARS outbreak of 2003, and how it was directly linked to the practice of consuming bushmeat in China.

 

In the wake of the SARS outbreak China – at least for a time – cracked down on many of these `wild flavor’ establishments, although they reportedly still flourish in some parts of China.

 

Yesterday, the British papers were filled with stories on the importation and sale of illegal bushmeat in the UK, including reports of chimpanzee meat being sold in some restaurants. 

 

A couple of links to articles include:

 

Meat from chimpanzees ‘is on sale in Britain’ in lucrative black market

Chimp meat discovered on menu in Midlands restaurants

 

 

The slaughtering of these intelligent (and often endangered) primates for food (but mostly profit) is sufficiently disturbing in its own right, but the dangers inherent in such practices are hardly trivial.

 

The killing, butchering, and even consumption of bushmeat have the very real potential of introducing zoonotic pathogens to humans. We saw that happen in 2003 with SARS, and it believed that this was how HIV was introduced into the human population as well.

 

While most people think of bushmeat hunting as something that a few indigenous tribes in Africa might do to feed their protein-starved communities, the reality is that hundreds of tons of bushmeat are butchered and exported (usually smuggled) to Europe, Asia, and North America every year.

 

In the summer of 2010 headlines were made when a study – published in the journal Conservation Letters  looked at the amount of smuggled bushmeat that was coming into Paris’s Charles de Gaulle airport over a 17 day period on flights from west and central Africa.

 

An Associated Press article provides the details (link & excerpt below)

 

 

Tons of Bushmeat Smuggled Into Paris, Study Finds

 

By MARIA CHENG and CHRISTINA OKELLO Associated Press Writers

PARIS June 17, 2010 (AP)

(EXCERPT)

Experts found 11 types of bushmeat including monkeys, large rats, crocodiles, small antelopes and pangolins, or anteaters. Almost 40 percent were listed on the Convention on International Trade in Endangered Species.

 

Based on what officials seized — 414 pounds (188 kilos) of bushmeat — the researchers estimated that about five tons of bushmeat gets into Paris each week.

(Continue . . . )

 

In 2005, the CDC’s EID Journal carried a perspective article on the dangers of bushmeat hunting by Nathan D. Wolfe, Peter Daszak, A. Marm Kilpatrick, and Donald S. Burke.

 

Bushmeat Hunting, Deforestation, and Prediction of Zoonotic Disease

 

It’s an interesting article, and it describes how it may take numerous transmissions of a zoonotic pathogen to man – over a period of years or decades – before it adapts well enough to human physiology to support human-to-human transmission.

 

Bushmeat hunting is a common intersection between man and reservoirs of zoonotic viruses, with a strong potential for an infection to occur.

 

One of those zoonotic diseases of concern is monkeypox.

 

In recent years we’ve seen an increase in the number of outbreaks of in central and western Africa, and even a rare outbreak in the United States in 2003 when an animal distributor imported hundreds of small animals from Ghana, which in turn infected prairie dogs that were subsequently sold to the public (see MMWR  Update On Monkeypox 2003)

 

image

(Photo Credit CDC PHIL)

 

While dubbed `monkeypox’, this less lethal cousin to smallpox is probably more commonly found in rodents than in monkeys.  Both of which are often targets of bushmeat hunters.

 

No vaccine is available for monkeypox, but the smallpox vaccination is said to reduce the risk of infection.

 

Just a few of the other viruses of concern include Hendra, Nipah, Ebola, many variations of SIV (Simian immunodeficiency virus), and of course . . .  Virus X.   

 

The one we don’t know about.  Yet.

 

For more on this we turn again to Nathan Wolfe, `The Virus Hunter’  and founder of Global Viral Forecasting Initiative (GVFI), who spends half his time in the wilds of Cameroon testing bushmeat – and hunters – looking for virus X.

 

I’ve written about Nathan Wolf several times over the years, including:

 

Nathan Wolfe And The Doomsday Strain
Nathan Wolfe: Virus Hunter

 

I can also highly recommend an absolutely fascinating TED Talk by Dr. Wolfe.

 

TED stands for Technology, Entertainment, Design.  Each year they hold a 4 day long event at Long Beach, California where 50 people are urged to give the 18-minute talk of their lives.

 

And believe me, this is one talk you don’t want to miss.

image
Video Link

 

While many people are understandably outraged or disgusted by the notion of bushmeat hunting, for virologists, the impact is much broader. 

 

Three quarters of human diseases originated in other animal species, and there are undoubtedly many more out there, waiting for an opportunity to jump to a new host.

 

Sadly, the role of `wild flavor’ cuisine in SARS epidemic in China and the introduction of HIV to humans via the hunting of bushmeat in Africa, it would appear, are lessons we have yet to fully embrace.

[Avian Flu Diary] Arkansas Earthquake Swarm: 4.7 Magnitude Overnight

Posted by Automator On February - 28 - 2011

(Mon, 28 Feb 2011 09:09:00 +0000)

 

 

# 5343

 

 

Nine days ago I wrote about the ongoing swarm of earthquakes occurring in and around Guy, Arkansas in a blog called USGS: The Arkansas Earthquake Swarm. Since then the temblors have continued, with the latest being a 4.7 and a 3.8 magnitude quake overnight.

 

 image

Note: The two latest shocks (depicted by the blue boxes) are obscuring an additional 52 smaller quakes in the past 7 days in this graphic.

 

 

While a bit unnerving for local residents, based on the USGS produced shake map for last night’s shallow 4.7 magnitude event, the quake was likely to be only moderately felt north of Little Rock, and damage – if any – should be `very light’.

 

image

 

Arkansas is no stranger to seismic events, although the main quake dangers are focused more in the northeast corner of the state, and associated with the New Madrid fault line.

 

image

 

Strong – even damaging quakes – have occurred outside of the New Madrid region in Arkansas over recorded history.  On the University of Arkansas’s (Little Rock) earthquake history page you’ll find descriptions of a number of quakes over the past 200 years.

 

One of the largest in recent memory occurred on New Year’s Day, 1969, and is briefly described:

 

On January 1, 1969, a tremor centered about 19 miles northwest of Little Rock and caused much commotion in the area. In Little Rock, plaster cracked, and furniture was moved about in some homes; and trees and utility wires swayed and shook throughout a wide area. The shock was also noted by residents in southern Missouri and western Tennessee.

 

 

In 1982 and again in 2001 a prolonged series of temblors struck very near the same region as we are seeing activity today, in what was called the Enola Earthquake Swarms

 

Enola is located only 20 miles or so to the south-east of this current area of activity. The Arkansas Geological Survey website gives a nice accounting of this swarm. 

 

A small excerpt follows:

 

The Enola swarm was initiated by a magnitude 1.2 earthquake recorded on January 12, 1982 near the town of Enola in Faulkner County, Arkansas. Since then, over 40,000 seismic events have been recorded in the Enola area. Most of the recorded seismic events are microquakes, but at least 93 earthquakes have been felt in the local area by at least one person during the first year of seismic activity. Earthquake magnitudes have not exceeded a 4.5, which occurred on Jan. 21, 1982. No structural damage has ever occurred, although there have been reports of broken china.

 

 

As far as whether these latest shocks are a harbinger of bigger things to come?   The USGS has this to say about earthquake swarms east of the Rockies.

 

Earthquake swarms are common east of the Rocky Mountains; although none of the others have involved so many small earthquakes as the central Arkansas swarms. Scientists don’t know why swarms start, why they stop, or how long to expect them to last.

The possibility of a larger earthquake cannot be discounted but none of the other swarms have given us any reason to expect an earthquake large enough to cause significant damage in central Arkansas in the near future.

Most of North America east of the Rocky Mountains has infrequent earthquakes that can strike anywhere at irregular intervals. The causes of earthquakes are not understood well enough for us to predict earthquakes reliably.

 

Since earthquakes are unpredictable, the only rational response if you live in a seismically active area is to be prepared to deal with one if it happens.

 

In Because It Can Happen Here, I provided a long list of preparedness links, which I would encourage you to follow.

 

FEMA, READY.GOV and the American Red Cross all strongly encourage you to be prepared to deal with a wide range of emergencies, including earthquakes, fires, tornadoes, floods, or hurricanes.

 

They know that during a major crisis, they may not be able to provide assistance to everyone during the first crucial 72 hours.  

 

You and your family need to be capable of fending for yourselves, and hopefully helping your neighbors, until help can arrive and services are restored.

 

As Ready.gov reminds us:

image

Do it today.

[Flu Wiki Forum] Community Open Thread February 27 2011 to …

Posted by Automator On February - 28 - 2011

(Sun, 27 Feb 2011 21:43:04 GMT) Welcome, new posters! Lurkers are always welcome to register and join in the discussions.
Not sure where to post?  Want to communicate with the Mods?  Need some help?  Post on this thread.  
The previous Community Open Thread is here.

[Flu Wiki Forum] Egypt February 27 2011 to …

Posted by Automator On February - 28 - 2011

(Sun, 27 Feb 2011 21:37:32 GMT) This Diary is to report and discuss the situation in Egypt.
The prior Egypt news diary is here.

Map by Okieman (added by DemFromCT):

…Thanks to cottontop for the diligent translation and news-hounding.  

[Crof's H5N1] Indonesia: Two in Garut hospital with suspected H5N1

Posted by Automator On February - 27 - 2011

Via Ida’s Bird Flu Information Corner: Garut, West Java ::: Baby is suspected to contract bird flu. Excerpt:

A 7-month-old baby named Lena, rushed to dr Slamet in Kabupaten Garut, West Java, on early Saturday (26/2) and treated in bird flu isolation unit. 

The baby developed coughing, fever and breathing difficulty. 

Hundreds of chickens had suddenly died of bird flu H5N1 in patient’s neighborhood, Kampung Cangkuang, Desa Bagendit, Kecamatan Banyuresmi. She is reported to have contact with the diseased chickens. 

Head of Livestock Division of Kecamatan Banyuresmi, Nenok Kusmiati, is being treated in the same hospital as bird flu suspect patient.

In another post, Ida has more details on the second case. It’s especially disturbing because the person is in charge of poultry disease management in the region.

[Crof's H5N1] Fresh case of bird flu confirmed in S. Korea

Posted by Automator On February - 27 - 2011

Via Xinhua: Fresh case of bird flu confirmed in S. Korea. Excerpt:

South Korea on Sunday confirmed an additional outbreak of bird flu in a southeastern region, raising fears of further spread, local media reported. 

The deadly H5N1 avian influenza virus was found at a chicken farm in Yangsan, South Gyeongsang province, after some 60 chickens on the farm died Thursday. 

Quarantine authorities had culled 300 chickens and 100 ducks on the farm as a precautionary measure before the test results came out on Sunday. 

The latest outbreak is the first to be confirmed in three years in South Gyeongsang province, and the provincial government plans to cull birds within a 500-meter radius of the infected farm.

[Flu Wiki Forum] News Reports for February 27, 2011

Posted by Automator On February - 27 - 2011

(Sat, 26 Feb 2011 22:58:15 GMT)

Reminder: Please do not post whole articles, just snippets and links, and do not post articles from the Las Vegas Review-Journal. Thanks!

Indonesia

?  Central Java: 14 villagers from 2 villages suffer ILI symptoms similar to bird flu (translated) (Link)

South Korea

?  Fresh bird flu strain confirmed in southern South Korea (Link)

United States

?  SD: Flu widespread in South Dakota (Link)



?  H (Link)

News for February 26, 2011 is here.


Thanks to all of the newshounds!
Special thanks to the newshound volunteers who translate international stories - thanks for keeping us all informed!

Other useful links:

WHO A(H1N1) Site

WHO H5N1 human case totals, last updated February 25, 2011
Charts and Graphs on H5N1 from WHO
Google Flu Trends (U.S.)
CDC Weekly Influenza Summary
Map of seasonal influenza in the U.S.
CIDPC (Canada) Weekly FluWatch
UK RCGP Weekly Data on Communicable and Respiratory Diseases
Flu Wiki Main Page

[Crof's H5N1] Swine flu: Why didn’t it kill us all?

Posted by Automator On February - 27 - 2011

Via the Winnipeg Free PressSwine flu: still waiting for the Big One. The author, Allen Abel, describes how H1N1 came out of nowhere in the spring of 2009 and scared us all silly. Then he goes on:

Two years later, I am in the office of one of America’s most honoured and decorated medical leaders — Dr. Anthony Fauci, director of the National Institute of Allergy and Infectious Diseases of the National Institutes of Health, holder of the Presidential Medal of Freedom and the National Medal of Science — to ask a simple question: Why didn’t we all die? 

“Bottom line, it was luck,” Dr. Fauci says. “We were lucky.” 

Anthony Fauci is a bright-eyed, unquenchably energetic son of Brooklyn; his father and my mother went to the same high school. Welcoming a visitor, he sprints to his computer and punches up a slide show: The H1N1 Vaccine Challenge. In 2009, Dr, Fauci explains, the swine flu strain wasn’t identified as a threat until April; it began to spread rapidly from its Mexican nexus at the end of August. 

“The flu came right at Labour Day, right when the kids were going back to school,” the scientist says. “Late virus recognition, early flu season, greatly reduced time to formulate and perform clinical trials on a vaccine. A perfect storm.” 

“Actually,” he smiles, “the PERFECT storm would have been a really virulent one that killed everybody.” 

At the time, swine flu was perfect enough. 

“It was the deaths among children that were the anomaly,” Dr. Fauci says. “We average from seven to 40,000 deaths a year from influenza in this country. The total in 2009 was about 12,000, so not far from the median. 

“But there were disproportionately more deaths in children. Not a cataclysm, but two or three times more kids died than usually die.”